CDS

Accession Number TCMCG051C31838
gbkey CDS
Protein Id XP_024466369.1
Location join(19047768..19047806,19048076..19048336,19048434..19048538,19048870..19048935,19049104..19049325,19050066..19050638,19051219..19051839,19052121..19052297,19052378..19052464)
Gene LOC7490367
GeneID 7490367
Organism Populus trichocarpa

Protein

Length 716aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024610601.1
Definition protein NEDD1 isoform X3 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category T
Description WD40 repeats
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K16547        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000242        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000281        [VIEW IN EMBL-EBI]
GO:0000910        [VIEW IN EMBL-EBI]
GO:0000911        [VIEW IN EMBL-EBI]
GO:0000919        [VIEW IN EMBL-EBI]
GO:0000922        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005813        [VIEW IN EMBL-EBI]
GO:0005814        [VIEW IN EMBL-EBI]
GO:0005815        [VIEW IN EMBL-EBI]
GO:0005819        [VIEW IN EMBL-EBI]
GO:0005828        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005874        [VIEW IN EMBL-EBI]
GO:0005876        [VIEW IN EMBL-EBI]
GO:0005929        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0032465        [VIEW IN EMBL-EBI]
GO:0032467        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032506        [VIEW IN EMBL-EBI]
GO:0032886        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0036064        [VIEW IN EMBL-EBI]
GO:0042995        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044380        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044441        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044450        [VIEW IN EMBL-EBI]
GO:0044463        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045787        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0051781        [VIEW IN EMBL-EBI]
GO:0060236        [VIEW IN EMBL-EBI]
GO:0061640        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070507        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071539        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072698        [VIEW IN EMBL-EBI]
GO:0090068        [VIEW IN EMBL-EBI]
GO:0090224        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:0099513        [VIEW IN EMBL-EBI]
GO:0120025        [VIEW IN EMBL-EBI]
GO:0120038        [VIEW IN EMBL-EBI]
GO:1902410        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1905508        [VIEW IN EMBL-EBI]
GO:2000694        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGAAAAGGCATGCTCAGATCAACGAGGGAGACCAGGAATCTTTATCAGCTATTAGCTTTAGTAACAAGGGATCTAGATATATATGCTCTGGAGGAAGCGGTCAAGTAGTAAGAATATGGGATCTGCAGAGGAAGCGCTGTATTAAATCGTTGAGGGGTCATACCAGTACAATAACAGGTGCTATGTACAATTGCAAAGATGAGCACCTGGCTTCCATAAGTTTGAGTGGGGATCTTATCCTTCACAACCTTGCATCTGGTGCAAGGGCGACAGAACTCAAGGACCCACACGAACAGGTACTAAGGGTTCTTGATTATTCACGAGTTAGCCGACACCTTTTAGTGACCGCAGGTGATGATGGTTCTGTACATTTGTGGGATATAACCAGTCGCAGCCCAAAGGTTTCATGGTTGAAACAACATTCTGCTCCAACTGTTGGTATTAGCTTCTCACCGTCAAATGACAAGATAATAGCTAGTGTTGGACTGGATAAAAAACTATACACTTATGAATCAGGGTCTAGAAGGCACACATCTCTCATTTCTTACGAGGCGCCTTTTTCTTCGCTGGCTTTTAGAGATGATGGTTTGATTCTGGCAGCTGGAACCAGTAGTGGGAGGGTGGTGTTCTATGATGTTCGAGGAAAACCACAGCCTTTCACCGTTCTCCATGCTTATGGCAGTTCAGAGGCTGTTACAAGTTTATGCTGGCAAAGATCAAAACCAGTTATTGTAAATGAGAGCACCTGCACTCCTGAGATAGCTCTTTTGGGAGGTGCTGTTGATGATTCCATTCTTATGCCAGATCCTCTTCCTTCTGTAACATCATCTAGTGTTGCTCTATCCACCTCAGTATCTGGCTCTGGTAATACTGGTCGTTCAGGTCTTTCAATAGAATCATCATCTCTAACAGCAATCACTAGTGGACCTGCATCAACCATGTCCAATCTGACTTTAGCAGAGGAAACACCACATCAAAGCCATCTTTGGCCCGGAACATTGATGAAATTAAATCCTCGTTCTAGTTACAATTTCAAGGATGAAATGGAGGTGTTTTCCCCGCTTGCGGATGTTCAGCCTATCACACCCTCACTTGATAAGTTTTGGGATGATCAGGAGGGATTGAAAAAGGATAATCTATCTGTTGATAAGAAACCTTCATCGTTGTTGTTTCCTTCATCCATTAGGAGATTTCCTTTTCAAGAGGATGGGATCAATGATCATCCCATATTTGATTGGAAATCCAGTTCAACCTCAAGGCAGGATGAGGCCCGGTCTTTCACCTTACCAGGGGGATCTACTCCATCTCCATCTTCCAAGAGTGAAGATTCCTCCATCACTCCTCCAGAAGCTTGGGGTGGTGAGAGACTATCTGATAGTATTGCTCACCTACACCAGCCACTAAATTTACCATCTCGTTTTGCGATGACTTCTGGGAGTTCAACATTAGGATCAATGTTTTCTAGTTTGCAAGATCTGTCCTCTTCAACAAATCAGACAGGTACGAGCTCATTGAATAATTCCAGCTGCAGCTTTTCAAATCTGCACACCAGAGATGTCTCTTTGAATCAGGAGACTTCAATGGGATTTCCAGAACACATTTCCTCCAGTTCCATGTCTCTGTCATTAGGTACAAAACACATCACGGAACTAGCTAGCCTTGAAGCATCTGGACCAGCATCATTAAACCAACCTCGCAGGTTTTCAACTTTTGCTGAGAGAATAAACACTACTGCTTCCTTCAGTGATGGGACATCTCTCTCAGTGGTTTCACCAAAAACAAAGAAAACAGGAGTTGAAACTAGGGAAGAGCTGCTGAATAGCATATTGTCGAGGTCTGATGCATTGGCGGTCACAGAACCAGGAATTCTTCCAGCAATGAACGGAGGAGCCACACAGCCACACAAAATCCTTCAGCCAGATACACAGCAGGGGAGTTCGTTCACGCTTCAGCTCTTCCAGCGTACTCTTGAAGAAACTCTTGATTCATTTCAGAAATCCATACATGAGGATATGAGGAGCCTTCATATAGAAATTCTTAGACAATTTCATATGCAGGAGATGGAATTGTCCGGTGTGATGAACTCAATCCTGGAAAACCAAGCTGAACTGATGAAAGAAATCAAGTCTCTTGGGAAAGAAAACTAA
Protein:  
MEKRHAQINEGDQESLSAISFSNKGSRYICSGGSGQVVRIWDLQRKRCIKSLRGHTSTITGAMYNCKDEHLASISLSGDLILHNLASGARATELKDPHEQVLRVLDYSRVSRHLLVTAGDDGSVHLWDITSRSPKVSWLKQHSAPTVGISFSPSNDKIIASVGLDKKLYTYESGSRRHTSLISYEAPFSSLAFRDDGLILAAGTSSGRVVFYDVRGKPQPFTVLHAYGSSEAVTSLCWQRSKPVIVNESTCTPEIALLGGAVDDSILMPDPLPSVTSSSVALSTSVSGSGNTGRSGLSIESSSLTAITSGPASTMSNLTLAEETPHQSHLWPGTLMKLNPRSSYNFKDEMEVFSPLADVQPITPSLDKFWDDQEGLKKDNLSVDKKPSSLLFPSSIRRFPFQEDGINDHPIFDWKSSSTSRQDEARSFTLPGGSTPSPSSKSEDSSITPPEAWGGERLSDSIAHLHQPLNLPSRFAMTSGSSTLGSMFSSLQDLSSSTNQTGTSSLNNSSCSFSNLHTRDVSLNQETSMGFPEHISSSSMSLSLGTKHITELASLEASGPASLNQPRRFSTFAERINTTASFSDGTSLSVVSPKTKKTGVETREELLNSILSRSDALAVTEPGILPAMNGGATQPHKILQPDTQQGSSFTLQLFQRTLEETLDSFQKSIHEDMRSLHIEILRQFHMQEMELSGVMNSILENQAELMKEIKSLGKEN